species:   Fugra
pid:       PID0986
parent:    FgmilR-7dps-102
paralog:   
locus:     NC_026477.1:6032393-6032534
matures:   ['UUUGGCUGAUCGACUCUGUUGGA', 'AGACGGGGUUCGCUUCGCGCCGCCUU']
srr:       SRR6516245
genome:    /Users/jax/+Genomes/Fungal_genomes/Fugra.GCF_000240135.3_ASM24013v3_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516245.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516245.cram NC_026477.1:6032393-6032534

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

     ****************************                                                                              *************************      
AGAAACGAGACGGGGUUCGCUUCGCGCCGCCUUGCCUUUUGUUGUCUUCUCAACAUCUGUCAUUGCGUGGUCACAGAUUGAUCGCCCCUGUGCCCGCCUUUUGUCUUUUGCCUUUUGGCUGAUCGACUCUGUUGGAGUGUCU
(((.((..((((((((.((..(((.(((((..((.(...(((((......)))))...).))..))((((.(((((...........))))).))))...................)))))).))))))))))...)).)))
-----------------------------------------------------------------------------------------------------------------UUUGGCUGAUCGACUCUGUUGGA------ l=23 a=0 c
-------AGACGGGGUUCGCUUCGCGCCGCCUU------------------------------------------------------------------------------------------------------------- l=26 a=0 c*
-----------------------------------------------------------------------------------------------------------------UUUGGCUGAUCGACUCUGUUGGA------ l=23 a=0 ma
-------AGACGGGGUUCGCUUCGCGCCGCCUU------------------------------------------------------------------------------------------------------------- l=26 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-000110001100
fn-001
